Alfalfa mosaic virus RNA 1 5′ UTR stem-loop
The Alfalfa mosaic virus RNA 1 5′ UTR stem-loop represents a putative stem-loop structure found in the 5′ UTR in RNA 1 of alfalfa mosaic virus. RNA 1 is responsible for encoding the viral replicase protein P1. This family is required for negative strand RNA synthesis in the alfalfa mosaic virus and may also be involved in positive strand RNA synthesis.[1]
| Alfalfa mosaic virus RNA 1 5′ UTR stem-loop | |
|---|---|
 Predicted secondary structure and sequence conservation of Alfalfa mosaic virus RNA 1 5′ UTR stem-loop | |
| Identifiers | |
| Symbol | AMV_RNA1_SL |
| Rfam | RF00196 |
| Other data | |
| RNA type | Cis-reg |
| Domain(s) | Eukaryota; Viruses |
| SO | SO:0000204 |
| PDB structures | PDBe |
References
- Vlot AC, Bol JF (October 2003). "The 5′ untranslated region of alfalfa mosaic virus RNA 1 is involved in negative-strand RNA synthesis". Journal of Virology. 77 (20): 11284–11289. doi:10.1128/JVI.77.20.11284-11289.2003. PMC 224982. PMID 14512577.
External links
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