Allelic exclusion

Allelic exclusion has been observed most often in genes for cell surface receptors and has been extensively studies in immune cells such as B lymphocytes. Allelic exclusion of immunoglobulin (Ig) heavy chain and light chain genes in B cells forms the genetic basis for the presence of only a single type of antigen receptor on a given B lymphocyte, which is central in explaining the ‘one B cell — one antibody’ rule.[6] The variable domain of the B-cell antigen receptor is encoded by the V, (D), and J gene segments, the recombination of which gives rise to Ig gene allelic exclusion. V(D)J recombination occurs imprecisely, so that while transcripts from both alleles are expressed, only one is able to give rise to a functional surface antigen receptor. If no successful rearrangement occurs on either chromosome, the cell dies.

The allelic exclusion of light chain genes Igκ and Igλ is a process that is controlled by the monoallelic initiation of V(D)J recombination. While little is known about the mechanism leading to the allelic exclusion of Igλ genes, the Igκ locus is generally inactivated by RAG-mediated deletion of the exon Cκ. The V(D)J recombination step is a random and non-specific process that occurs one allele at a time where segments V, (D) and J are rearranged to encode the variable region, resulting in a fraction of functional genes with a productive V(D)J region.[11] Allelic exclusion is then enforced via feedback inhibition where the functional Ig gene inhibits V(D)J rearrangement of the second allele. While this feedback mechanism is mainly achieved through inhibition of the juxtaposition of V and D-J segments, the down-regulation of transcription and suppression of RAG accessibility also plays a role.[12]

Vomeronasal sensory neurons are found in the vomeronasal organ at the nasal septum base and their specialty is in pheromone detection.[13][14][15][16][17][18] A vomeronasal receptor, V1R, exhibits allelic exclusion.[13] When a V1R receptor gene is expressed, an odorant receptor gives negative feedback that prevents transcription of other V1R receptor genes.[13][14][15][16] In mice, vomeronasal sensory neurons, an odorant receptor coding sequence's exogenous transcription from a V1R promoter can stop endogenous V1R genes from being transcribed.[13][14][15][16] They[13] also obtained data supporting monoallelic expression of V1rb2^mv and V1rb2^vg alleles and monogenic expression of the V1rb2 locus.[13]

Vomeronasal sensory neurons are found in the vomeronasal organ at the nasal septum base and their specialty is in pheromone detection.[13][14][15][16][17][18] A vomeronasal receptor, V1R, exhibits allelic exclusion. When a V1R receptor gene is expressed, an odorant receptor gives negative feedback that prevents transcription of other V1R receptor genes.[13][14][15][16] In mice vomeronasal sensory neurons, an odorant receptor coding sequence's exogenous transcription from a V1R promoter can stop endogenous V1R genes from being transcribed.[13][14][15][16] They[13] also obtained data supporting monoallelic expression of V1rb2^mv and V1rb2^vg alleles and monogenic expression of the V1rb2 locus.[13]

Monoallelic expression was also found in mice olfactory receptor genes in olfactory sensory neurons.[14][15][16] An upstream cis-acting DNA region controls an olfactory receptor gene cluster's activation and resulted in monogenic expression of one olfactory receptor gene.[14][15][16] The expressed coding region's disruption or deletion resulted in expression of a second olfactory receptor gene.[15] Based on this, they[15] hypothesized that in order to enforce the "one receptor-one neuron rule” (Serizawa et al, 2003[15]), one olfactory receptor gene's random activation and the expressed gene product's negative feedback are necessary.[14][15][16]

Intracellular GATA3 expression is a crucial component of T cell receptor beta (TCR𝛽) allelic exclusion in mammalian cells.[14][15][16][19][20] GATA3 transgenic overexpression by a 2.5- to 5-fold increase partly due to Gata3 transcriptional activation from monoallelic to biallelic primarily resulted in both alleles of TCR𝛽 recombining.[14] Intracellular GATA3 expression can divide wild-type immature thymocyte cell populations.[14][15][16][19][20] Although cells regardless of GATA3 expression level yielded functional TCR𝛽 sequences, there was nearly sole recombination of one Tcrb locus in lowly expressed GATA3 cells and constant recombination of both alleles in highly expressed GATA3 cells.[14]

V𝛽 Recombination signal sequences (RSSs) with poor qualities suppressed one allele's expression of two TCR𝛽 genes.[21][22] These poor quality V𝛽 RSSs decreased the chances of upstream V𝛽 and V31 recombination on the same allele, which in turn enabled functional TCR𝛽 genes’ monoallelic assembly and expression.[21][22] However, poor quality V𝛽 RSSs were unlikely to result in monogenic TCR𝛽 expression alone and might have involved other epigenetic processes.[21][22] RSSs is involved in mammalian TCR𝛽 genes’ monogenic assembly and expression and may also be involved in other mammalian TCR-related genes.[21] Low quality V𝛽 recombinase targets randomly constrain two functional rearrangements’ production which imposes TCR𝛽 allelic exclusion.[22]